accumulateWith(Top &op) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
activate() | mat::FileWritable | [static] |
add_identity(Treal alpha) | mat::MatrixBase< Treal, Tmatrix > | [inline] |
add_values(std::vector< int > const &rowind, std::vector< int > const &colind, std::vector< Treal > const &values) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
add_values(std::vector< int > const &rowind, std::vector< int > const &colind, std::vector< Treal > const &values, std::vector< int > const &rowPermutation, std::vector< int > const &colPermutation) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
assign_from_sparse(std::vector< int > const &rowind, std::vector< int > const &colind, std::vector< Treal > const &values) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
assign_from_sparse(std::vector< int > const &rowind, std::vector< int > const &colind, std::vector< Treal > const &values, SizesAndBlocks const &newRows, SizesAndBlocks const &newCols) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
assign_from_sparse(std::vector< int > const &rowind, std::vector< int > const &colind, std::vector< Treal > const &values, std::vector< int > const &rowPermutation, std::vector< int > const &colPermutation) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
assign_from_sparse(std::vector< int > const &rowind, std::vector< int > const &colind, std::vector< Treal > const &values, SizesAndBlocks const &newRows, SizesAndBlocks const &newCols, std::vector< int > const &rowPermutation, std::vector< int > const &colPermutation) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
assignFromFull(std::vector< Treal > const &fullMat) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
assignFromFull(std::vector< Treal > const &fullMat, std::vector< int > const &rowPermutation, std::vector< int > const &colPermutation) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
clear() | mat::MatrixBase< Treal, Tmatrix > | [inline, virtual] |
diff(const MatrixSymmetric< Treal, Tmatrix > &A, const MatrixSymmetric< Treal, Tmatrix > &B, normType const norm, Treal const requestedAccuracy) | mat::MatrixSymmetric< Treal, Tmatrix > | [static] |
diffIfSmall(const MatrixSymmetric< Treal, Tmatrix > &A, const MatrixSymmetric< Treal, Tmatrix > &B, normType const norm, Treal const requestedAccuracy, Treal const maxAbsVal) | mat::MatrixSymmetric< Treal, Tmatrix > | [static] |
eucl(Treal const requestedAccuracy, int maxIter=-1) const | mat::MatrixSymmetric< Treal, Tmatrix > | |
eucl_diff(const MatrixSymmetric< Treal, Tmatrix > &A, const MatrixSymmetric< Treal, Tmatrix > &B, Treal const requestedAccuracy) | mat::MatrixSymmetric< Treal, Tmatrix > | [static] |
eucl_element_level_thresh(Treal const threshold) | mat::MatrixSymmetric< Treal, Tmatrix > | |
eucl_thresh(Treal const threshold, MatrixTriangular< Treal, Tmatrix > const *const Zptr=NULL) | mat::MatrixSymmetric< Treal, Tmatrix > | |
euclDiffIfSmall(const MatrixSymmetric< Treal, Tmatrix > &A, const MatrixSymmetric< Treal, Tmatrix > &B, Treal const requestedAccuracy, Treal const maxAbsVal, VectorType *const eVecPtr=0) | mat::MatrixSymmetric< Treal, Tmatrix > | [static] |
fileSize() | mat::FileWritable | |
FileWritable() | mat::FileWritable | [protected] |
FileWritable(FileWritable const &) | mat::FileWritable | [protected] |
frob() const | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
frob_diff(const MatrixSymmetric< Treal, Tmatrix > &A, const MatrixSymmetric< Treal, Tmatrix > &B) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline, static] |
frob_thresh(Treal const threshold) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
fullMatrix(std::vector< Treal > &fullMat) const | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
fullMatrix(std::vector< Treal > &fullMat, std::vector< int > const &rowInversePermutation, std::vector< int > const &colInversePermutation) const | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
gersgorin(Treal &lmin, Treal &lmax) const | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
get_all_values(std::vector< int > &rowind, std::vector< int > &colind, std::vector< Treal > &values) const | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
get_all_values(std::vector< int > &rowind, std::vector< int > &colind, std::vector< Treal > &values, std::vector< int > const &rowInversePermutation, std::vector< int > const &colInversePermutation) const | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
get_ncols() const | mat::MatrixBase< Treal, Tmatrix > | [inline] |
get_nrows() const | mat::MatrixBase< Treal, Tmatrix > | [inline] |
get_values(std::vector< int > const &rowind, std::vector< int > const &colind, std::vector< Treal > &values) const | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
get_values(std::vector< int > const &rowind, std::vector< int > const &colind, std::vector< Treal > &values, std::vector< int > const &rowPermutation, std::vector< int > const &colPermutation) const | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
getCols(SizesAndBlocks &colsCopy) const | mat::MatrixBase< Treal, Tmatrix > | [inline] |
getMatrix() const | mat::MatrixBase< Treal, Tmatrix > | [inline] |
getMatrix() | mat::MatrixBase< Treal, Tmatrix > | [inline] |
getPermutedAndSymmetrized(std::vector< int > const &rowind, std::vector< int > const &rowPermutation, std::vector< int > &newRowind, std::vector< int > const &colind, std::vector< int > const &colPermutation, std::vector< int > &newColind) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline, protected, static] |
getPermutedIndexes(std::vector< int > const &index, std::vector< int > const &permutation, std::vector< int > &newIndex) | mat::MatrixBase< Treal, Tmatrix > | [inline, protected, static] |
getRows(SizesAndBlocks &rowsCopy) const | mat::MatrixBase< Treal, Tmatrix > | [inline] |
getSizesAndBlocksForFrobNormMat(SizesAndBlocks &rows_new, SizesAndBlocks &cols_new) const | mat::MatrixSymmetric< Treal, Tmatrix > | |
getStatsCount(TypeCountMap &theMap) | mat::FileWritable | [protected, static] |
getStatsCountCopyAndAssign() | mat::FileWritable | [static] |
getStatsCountRead() | mat::FileWritable | [static] |
getStatsCountWrite() | mat::FileWritable | [static] |
getStatsFileSizes() | mat::FileWritable | [static] |
getStatsFileSizes(ObjPtrSet const &set) | mat::FileWritable | [protected, static] |
getStatsTime(TypeTimeMap &theMap) | mat::FileWritable | [protected, static] |
getStatsTimeCopyAndAssign() | mat::FileWritable | [static] |
getStatsTimeRead() | mat::FileWritable | [static] |
getStatsTimeWrite() | mat::FileWritable | [static] |
inMemorySet(bool inMem) | mat::MatrixBase< Treal, Tmatrix > | [inline, protected, virtual] |
is_empty() const | mat::MatrixBase< Treal, Tmatrix > | [inline] |
isOnFile() | mat::FileWritable | [inline] |
MatrixBase() | mat::MatrixBase< Treal, Tmatrix > | [inline, protected] |
MatrixBase(const MatrixBase< Treal, Tmatrix > &other) | mat::MatrixBase< Treal, Tmatrix > | [inline, protected] |
MatrixGeneral< Treal, Tmatrix > class | mat::MatrixBase< Treal, Tmatrix > | [friend] |
matrixPtr | mat::MatrixBase< Treal, Tmatrix > | [protected] |
MatrixSymmetric() | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
MatrixSymmetric(const MatrixSymmetric< Treal, Tmatrix > &symm) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline, explicit] |
MatrixSymmetric(const XY< Treal, MatrixSymmetric< Treal, Tmatrix > > &sm) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline, explicit] |
MatrixSymmetric(const MatrixGeneral< Treal, Tmatrix > &matr) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline, explicit] |
MatrixSymmetric< Treal, Tmatrix > class | mat::MatrixBase< Treal, Tmatrix > | [friend] |
MatrixTriangular< Treal, Tmatrix > class | mat::MatrixBase< Treal, Tmatrix > | [friend] |
matVecProd(Tvector &y, Tvector const &x) const | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
maxAbsValue() const | mat::MatrixBase< Treal, Tmatrix > | [inline] |
memory_usage() const | mat::MatrixBase< Treal, Tmatrix > | [inline] |
mixed_diff(const MatrixSymmetric< Treal, Tmatrix > &A, const MatrixSymmetric< Treal, Tmatrix > &B, Treal const requestedAccuracy) | mat::MatrixSymmetric< Treal, Tmatrix > | [static] |
mixed_norm(Treal const requestedAccuracy, int maxIter=-1) const | mat::MatrixSymmetric< Treal, Tmatrix > | |
mixed_norm_thresh(Treal const threshold) | mat::MatrixSymmetric< Treal, Tmatrix > | |
nnz() const | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
nvalues() const | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
obj_type_id() const | mat::MatrixSymmetric< Treal, Tmatrix > | [inline, virtual] |
ObjPtrSet typedef | mat::FileWritable | [protected] |
operator *=(Treal const alpha) | mat::MatrixBase< Treal, Tmatrix > | [inline] |
operator+=(const XYZ< Treal, MatrixSymmetric< Treal, Tmatrix >, MatrixSymmetric< Treal, Tmatrix > > &sm2) | mat::MatrixSymmetric< Treal, Tmatrix > | |
operator+=(const XYZ< Treal, MatrixGeneral< Treal, Tmatrix >, MatrixGeneral< Treal, Tmatrix > > &smm) | mat::MatrixSymmetric< Treal, Tmatrix > | |
operator+=(MatrixSymmetric< Treal, Tmatrix > const &A) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
operator+=(XY< Treal, MatrixSymmetric< Treal, Tmatrix > > const &sm) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
operator-=(MatrixSymmetric< Treal, Tmatrix > const &A) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
operator-=(XY< Treal, MatrixSymmetric< Treal, Tmatrix > > const &sm) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
operator=(const MatrixSymmetric< Treal, Tmatrix > &symm) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
operator=(const MatrixGeneral< Treal, Tmatrix > &matr) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
operator=(int const k) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
operator=(XY< Treal, MatrixSymmetric< Treal, Tmatrix > > const &sm) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
operator=(const XYZpUV< Treal, MatrixSymmetric< Treal, Tmatrix >, MatrixSymmetric< Treal, Tmatrix >, Treal, MatrixSymmetric< Treal, Tmatrix > > &sm2psm) | mat::MatrixSymmetric< Treal, Tmatrix > | |
operator=(const XYZ< Treal, MatrixSymmetric< Treal, Tmatrix >, MatrixSymmetric< Treal, Tmatrix > > &sm2) | mat::MatrixSymmetric< Treal, Tmatrix > | |
operator=(const XYZpUV< Treal, MatrixGeneral< Treal, Tmatrix >, MatrixGeneral< Treal, Tmatrix >, Treal, MatrixSymmetric< Treal, Tmatrix > > &smmpsm) | mat::MatrixSymmetric< Treal, Tmatrix > | |
operator=(const XYZ< Treal, MatrixGeneral< Treal, Tmatrix >, MatrixGeneral< Treal, Tmatrix > > &smm) | mat::MatrixSymmetric< Treal, Tmatrix > | |
operator=(const XYZ< MatrixTriangular< Treal, Tmatrix >, MatrixSymmetric< Treal, Tmatrix >, MatrixTriangular< Treal, Tmatrix > > &zaz) | mat::MatrixSymmetric< Treal, Tmatrix > | |
operator=(XpY< MatrixSymmetric< Treal, Tmatrix >, MatrixSymmetric< Treal, Tmatrix > > const &mpm) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
operator=(XmY< MatrixSymmetric< Treal, Tmatrix >, MatrixSymmetric< Treal, Tmatrix > > const &mm) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
mat::MatrixBase::operator=(const MatrixBase< Treal, Tmatrix > &other) | mat::MatrixBase< Treal, Tmatrix > | [inline, protected] |
mat::MatrixBase::operator=(const Xtrans< MatrixGeneral< Treal, Tmatrix > > &mt) | mat::MatrixBase< Treal, Tmatrix > | [inline, protected] |
mat::FileWritable::operator=(FileWritable const &) | mat::FileWritable | [protected] |
operator==(int k) const | mat::MatrixBase< Treal, Tmatrix > | [inline] |
quickEuclBounds(Treal &euclLowerBound, Treal &euclUpperBound) const | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
random() | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
randomZeroStructure(Treal probabilityBeingZero) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
read_from_buffer(void *buffer, const int n_bytes) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
read_from_buffer_base(void *buffer, const int n_bytes, const matrix_type mattype) | mat::MatrixBase< Treal, Tmatrix > | [protected] |
readFromFile() | mat::FileWritable | |
readFromFileBase(std::ifstream &file, matrix_type const mattype) | mat::MatrixBase< Treal, Tmatrix > | [protected] |
readFromFileProt(std::ifstream &file) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline, protected, virtual] |
real typedef | mat::MatrixSymmetric< Treal, Tmatrix > | |
resetSizesAndBlocks(SizesAndBlocks const &newRows, SizesAndBlocks const &newCols) | mat::MatrixBase< Treal, Tmatrix > | [inline] |
resetStats() | mat::FileWritable | [static] |
setElementsByRule(TRule &rule) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
setPath(char const *const newPath) | mat::FileWritable | [static] |
simple_blockwise_frob_thresh(Treal const threshold) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
ssmmUpperTriangleOnly(const Treal alpha, const MatrixSymmetric< Treal, Tmatrix > &A, const MatrixSymmetric< Treal, Tmatrix > &B, const Treal beta, MatrixSymmetric< Treal, Tmatrix > &C) | mat::MatrixSymmetric< Treal, Tmatrix > | [static] |
thresh(Treal const threshold, normType const norm) | mat::MatrixSymmetric< Treal, Tmatrix > | |
trace() const | mat::MatrixBase< Treal, Tmatrix > | [inline] |
trace_ab(const MatrixSymmetric< Treal, Tmatrix > &A, const MatrixSymmetric< Treal, Tmatrix > &B) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline, static] |
transfer(MatrixSymmetric< Treal, Tmatrix > &dest) | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
TypeCountMap typedef | mat::FileWritable | [protected] |
TypeTimeMap typedef | mat::FileWritable | [protected] |
VectorType typedef | mat::MatrixSymmetric< Treal, Tmatrix > | |
write_to_buffer(void *buffer, const int n_bytes) const | mat::MatrixSymmetric< Treal, Tmatrix > | [inline] |
write_to_buffer_base(void *buffer, const int n_bytes, const matrix_type mattype) const | mat::MatrixBase< Treal, Tmatrix > | [protected] |
write_to_buffer_count(int &n_bytes) const | mat::MatrixBase< Treal, Tmatrix > | [inline] |
writeAndReadAll() | mat::FileWritable | [static] |
writeToFile() | mat::FileWritable | |
writeToFileBase(std::ofstream &file, matrix_type const mattype) const | mat::MatrixBase< Treal, Tmatrix > | [protected] |
writeToFileProt(std::ofstream &file) const | mat::MatrixSymmetric< Treal, Tmatrix > | [inline, protected, virtual] |
~FileWritable() | mat::FileWritable | [protected, virtual] |