+ exec + rm -rf /rpmbuild + mkdir -p /rpmbuild + su -c 'rpmbuild -ba /builddir/build/SPECS/inchi.spec --define "debug_package %{nil}" --undefine _annotated_build --define "_missing_doc_files_terminate_build %{nil}" --define "_emacs_sitestartdir /usr/share/emacs/site-lisp/site-start.d" --define "_emacs_sitelispdir /usr/share/emacs/site-lisp" --nocheck ' mockbuild Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.5mpLkd + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf INCHI-1-SRC + /usr/bin/unzip -qq /builddir/build/SOURCES/INCHI-1-SRC.zip + STATUS=0 + '[' 0 -ne 0 ']' + cd INCHI-1-SRC + /usr/bin/unzip -qq /builddir/build/SOURCES/INCHI-1-DOC.zip + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/unzip -qq /builddir/build/SOURCES/INCHI-1-TEST.zip + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (inchi-rpm.patch):' Patch #0 (inchi-rpm.patch): + /usr/bin/patch --no-backup-if-mismatch -p1 -b --suffix .r --fuzz=0 patching file INCHI_API/demos/inchi_main/gcc/makefile + for file in LICENCE readme.txt + dos2unix -k LICENCE dos2unix: converting file LICENCE to Unix format... + for file in LICENCE readme.txt + dos2unix -k readme.txt dos2unix: converting file readme.txt to Unix format... + pushd INCHI-1-TEST/test ~/build/BUILD/INCHI-1-SRC/INCHI-1-TEST/test ~/build/BUILD/INCHI-1-SRC + unzip -d reference -qq -a InChI_TestSet-result.zip + dos2unix -k reference/its-non-std-01.txt reference/its-non-std-02.txt reference/its-non-std-03.txt reference/its-non-std-04.txt reference/its-non-std-05.txt reference/its-non-std-06.txt reference/its-non-std-07.txt reference/its-non-std-08.txt reference/its-non-std-09.txt reference/its-non-std-10.txt reference/its-non-std-11.txt reference/its-non-std-12.txt reference/its-non-std-13.txt reference/its-non-std-14.txt reference/its-non-std-15.txt reference/its-non-std-16.txt reference/its-non-std-17.txt reference/its-non-std-18.txt reference/its-non-std-19.txt reference/its-non-std-20.txt reference/its-non-std-21.txt reference/its-non-std-22.txt reference/its-non-std-23.txt reference/its-non-std-24.txt reference/its-non-std-25.txt reference/its-non-std-26.txt reference/its-non-std-27.txt reference/its-non-std-28.txt reference/its-std-01.txt reference/its-std-02.txt reference/its-std-03.txt reference/its-std-04.txt reference/its-std-05.txt reference/readme.txt dos2unix: converting file reference/its-non-std-01.txt to Unix format... dos2unix: converting file reference/its-non-std-02.txt to Unix format... dos2unix: converting file reference/its-non-std-03.txt to Unix format... dos2unix: converting file reference/its-non-std-04.txt to Unix format... dos2unix: converting file reference/its-non-std-05.txt to Unix format... dos2unix: converting file reference/its-non-std-06.txt to Unix format... dos2unix: converting file reference/its-non-std-07.txt to Unix format... dos2unix: converting file reference/its-non-std-08.txt to Unix format... dos2unix: converting file reference/its-non-std-09.txt to Unix format... dos2unix: converting file reference/its-non-std-10.txt to Unix format... dos2unix: converting file reference/its-non-std-11.txt to Unix format... dos2unix: converting file reference/its-non-std-12.txt to Unix format... dos2unix: converting file reference/its-non-std-13.txt to Unix format... dos2unix: converting file reference/its-non-std-14.txt to Unix format... dos2unix: converting file reference/its-non-std-15.txt to Unix format... dos2unix: converting file reference/its-non-std-16.txt to Unix format... dos2unix: converting file reference/its-non-std-17.txt to Unix format... dos2unix: converting file reference/its-non-std-18.txt to Unix format... dos2unix: converting file reference/its-non-std-19.txt to Unix format... dos2unix: converting file reference/its-non-std-20.txt to Unix format... dos2unix: converting file reference/its-non-std-21.txt to Unix format... dos2unix: converting file reference/its-non-std-22.txt to Unix format... dos2unix: converting file reference/its-non-std-23.txt to Unix format... dos2unix: converting file reference/its-non-std-24.txt to Unix format... dos2unix: converting file reference/its-non-std-25.txt to Unix format... dos2unix: converting file reference/its-non-std-26.txt to Unix format... dos2unix: converting file reference/its-non-std-27.txt to Unix format... dos2unix: converting file reference/its-non-std-28.txt to Unix format... dos2unix: converting file reference/its-std-01.txt to Unix format... dos2unix: converting file reference/its-std-02.txt to Unix format... dos2unix: converting file reference/its-std-03.txt to Unix format... dos2unix: converting file reference/its-std-04.txt to Unix format... dos2unix: converting file reference/its-std-05.txt to Unix format... dos2unix: converting file reference/readme.txt to Unix format... + sed -i -e s,./inchi-1,../../INCHI_API/bin/Linux/inchi_main,g TestSet2InChI.sh + popd ~/build/BUILD/INCHI-1-SRC + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.8eV3eo + umask 022 + cd /builddir/build/BUILD + cd INCHI-1-SRC + pushd INCHI_API/demos/inchi_main/gcc ~/build/BUILD/INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc ~/build/BUILD/INCHI-1-SRC + /usr/bin/make 'OPTFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable' -j4 gcc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../src/e_0dstereo.c gcc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../src/e_ichimain.c gcc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../src/e_ichi_io.c gcc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../src/e_ichi_parms.c gcc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../src/e_inchi_atom.c gcc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../src/e_mol2atom.c gcc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../src/e_readinch.c gcc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../src/e_readmol.c ../src/e_0dstereo.c: In function 'set_0D_stereo_parities': ../src/e_0dstereo.c:2735:15: warning: 'rmin' may be used uninitialized in this function [-Wmaybe-uninitialized] if ( rmin / rmax < MIN_SINE ) { ~~~~~^~~~~~ ../src/e_0dstereo.c:2620:34: note: 'rmin' was declared here double bond_len_xy[4], rmax, rmin; ^~~~ ../src/e_0dstereo.c:2735:15: warning: 'rmax' may be used uninitialized in this function [-Wmaybe-uninitialized] if ( rmin / rmax < MIN_SINE ) { ~~~~~^~~~~~ ../src/e_0dstereo.c:2620:28: note: 'rmax' was declared here double bond_len_xy[4], rmax, rmin; ^~~~ ../src/e_0dstereo.c:957:73: warning: 'first_Up' may be used uninitialized in this function [-Wmaybe-uninitialized] int i, num_Up, num_Dn, bPrev_Up, cur_len_Up, cur_first_Up, len_Up, first_Up; ^~~~~~~~ gcc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../src/e_readstru.c gcc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../src/e_util.c gcc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../src/e_ichimain_a.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichican2.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichicano.c ../../../../INCHI_BASE/src/ichican2.c: In function 'CanonGraph': ../../../../INCHI_BASE/src/ichican2.c:3896:22: warning: the address of 'kLeast_rho_fix' will always evaluate as 'true' [-Waddress] if ( pzb_rho_fix && kLeast_rho_fix && 0 == qzb_rho_fix ) ^~ ../../../../INCHI_BASE/src/ichican2.c:3899:14: warning: the address of 'kLeast_rho_fix' will always evaluate as 'true' [-Waddress] if ( kLeast_rho_fix ) ^~~~~~~~~~~~~~ ../../../../INCHI_BASE/src/ichican2.c:3943:10: warning: the address of 'kLeast_rho' will always evaluate as 'true' [-Waddress] if ( kLeast_rho ) ^~~~~~~~~~ gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichi_io.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichierr.c ../../../../INCHI_BASE/src/ichierr.c:1:0: warning: ignoring #pragma warning [-Wunknown-pragmas] #pragma warning( disable : 4706 4127 4514 4100 4786 4996 4244 4267 ) gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichicans.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichiisot.c ../../../../INCHI_BASE/src/ichicans.c: In function 'UnmarkNonStereo': ../../../../INCHI_BASE/src/ichicans.c:441:42: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized] nPrevAtomRank = nRank[j]; ^ gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../libinchi/src/ichilnct.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichimak2.c ../../../../INCHI_BASE/src/ichican2.c:4099:10: warning: 'tvh' may be used uninitialized in this function [-Wmaybe-uninitialized] GetUnorderedPartitionMcrNode( &theta, tvh ) ) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../../../../INCHI_BASE/src/ichican2.c:4029:8: warning: 'tvc' may be used uninitialized in this function [-Wmaybe-uninitialized] if ( tvc == GetUnorderedPartitionMcrNode( &theta, tvc ) ) ^ gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichimake.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichimap1.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichimap2.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichimap4.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichinorm.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichiparm.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichiprt1.c ../../../../INCHI_BASE/src/ichimap4.c: In function 'map_stereo_bonds4': ../../../../INCHI_BASE/src/ichimap4.c:795:33: warning: 'at_to_n2' may be used uninitialized in this function [-Wmaybe-uninitialized] CurTreeRemoveIfLastAtom( cur_tree, at_to_n2 ); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../../../../INCHI_BASE/src/ichimap4.c:869:26: warning: 'at_to_n1' may be used uninitialized in this function [-Wmaybe-uninitialized] CurTreeRemoveIfLastAtom( cur_tree, at_to_n1 ); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichiprt2.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichiprt3.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichiqueu.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichiring.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichisort.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichister.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichitaut.c ../../../../INCHI_BASE/src/ichitaut.c: In function 'MarkTautomerGroups': ../../../../INCHI_BASE/src/ichitaut.c:3580:30: warning: the address of 'DfsPath' will always evaluate as 'true' [-Waddress] if ( !nDfsPathPos || !DfsPath ) { ^ gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichi_bns.c ../../../../INCHI_BASE/src/ichister.c: In function 'set_stereo_atom_parity': ../../../../INCHI_BASE/src/ichister.c:369:69: warning: 'first_Up' may be used uninitialized in this function [-Wmaybe-uninitialized] int i, num_Up, num_Dn, bPrev_Up, cur_len_Up, cur_first_Up, len_Up, first_Up; ^~~~~~~~ ../../../../INCHI_BASE/src/ichi_bns.c: In function 'ReInitBnStructForAltBns': ../../../../INCHI_BASE/src/ichi_bns.c:9949:45: warning: operation on 'pBond->cap' may be undefined [-Wsequence-point] pBond->nBondNonStereoAltBns = ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ pBond->nBlockNumberAltBns = ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pBond->nNumAtInBlockAltBns = 0; ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../libinchi/src/inchi_dll.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichiread.c ../../../../INCHI_BASE/src/ichi_bns.c: In function 'fix_special_bonds': ../../../../INCHI_BASE/src/ichi_bns.c:1968:64: warning: 'k_N' may be used uninitialized in this function [-Wmaybe-uninitialized] BOND_TYPE_DOUBLE == (at[i].bond_type[i1=j[k_N]] & BOND_TYPE_MASK ) ) ~~^~~~~~~ ../../../../INCHI_BASE/src/ichi_bns.c:2085:48: warning: 'i4' may be used uninitialized in this function [-Wmaybe-uninitialized] iedge = pBNS->vert[i].iedge[i4]; ^ ../../../../INCHI_BASE/src/ichi_bns.c:2008:48: warning: 'i2' may be used uninitialized in this function [-Wmaybe-uninitialized] iedge = pBNS->vert[i].iedge[i2]; ^ ../../../../INCHI_BASE/src/ichi_bns.c:2132:38: warning: 'n2' may be used uninitialized in this function [-Wmaybe-uninitialized] if ( 1 == bFound && ~~~~~~~~~~~~^~ 0 <= ( i4 = nNoMetalOtherNeighIndex2( at, i, n2, n3) ) ) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichirvr1.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichirvr2.c ../../../../INCHI_BASE/src/ichirvr2.c: In function 'RestoreAtomConnectionsSetStereo': ../../../../INCHI_BASE/src/ichirvr2.c:297:24: warning: operation on 'jv' may be undefined [-Wsequence-point] at[jv = at[n_vertex].neighbor[0]].valence + at[jv].num_H == 3 && ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ ../../../../INCHI_BASE/src/ichirvr2.c:299:24: warning: operation on 'jn' may be undefined [-Wsequence-point] at[jn = at[n_vertex].neighbor[1]].valence + at[jn].num_H == 3 && ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ ../../../../INCHI_BASE/src/ichirvr2.c: In function 'MovePlusFromS2DiaminoCarbon': ../../../../INCHI_BASE/src/ichirvr2.c:3188:19: warning: operation on 'pvS' may be undefined [-Wsequence-point] (pvS = pBNS->vert+i)->st_edge.cap == pvS->st_edge.flow && ~~~~~^~~~~~~~~~~~~~~ ../../../../INCHI_BASE/src/ichirvr2.c: In function 'AdjustTgroupsToForbiddenEdges2': ../../../../INCHI_BASE/src/ichirvr2.c:2838:20: warning: 'e' may be used uninitialized in this function [-Wmaybe-uninitialized] if ( !e->flow ) { /*@@@ ??? SHOULD BE ev ??? */ ~^~~~~~ gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichirvr3.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichirvr4.c ../../../../INCHI_BASE/src/ichirvr4.c: In function 'FixMoreHydrogenInFormula': ../../../../INCHI_BASE/src/ichirvr4.c:361:23: warning: operation on 'neigh' may be undefined [-Wsequence-point] at2[neigh=at2[i].neighbor[0]].chem_bonds_valence > at2[neigh].valence ~~~~~^~~~~~~~~~~~~~~~~~~ ../../../../INCHI_BASE/src/ichirvr4.c: In function 'AddRemIsoProtonsInRestrStruct': ../../../../INCHI_BASE/src/ichirvr4.c:3157:45: warning: the address of 'num_prot' will always evaluate as 'true' [-Waddress] for ( iComp = 0; iComp < num_components && num_prot; iComp ++ ) { ^~ gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichirvr5.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichirvr6.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ichirvr7.c ../../../../INCHI_BASE/src/ichirvr6.c: In function 'FixRestoredStructureStereo': ../../../../INCHI_BASE/src/ichirvr6.c:991:41: warning: 'pe' may be used uninitialized in this function [-Wmaybe-uninitialized] pe->flow -= delta; /* make single bond */ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ ../../../../INCHI_BASE/src/ichirvr6.c:998:16: warning: 'e' may be used uninitialized in this function [-Wmaybe-uninitialized] if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ^ gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ikey_dll.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/ikey_base26.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../libinchi/src/inchi_dll_main.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../libinchi/src/inchi_dll_a.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../libinchi/src/inchi_dll_a2.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../libinchi/src/inchi_dll_b.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../libinchi/src/ixa/ixa_inchikey_builder.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../libinchi/src/ixa/ixa_read_mol.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../libinchi/src/ixa/ixa_status.c ../../../libinchi/src/ixa/ixa_status.c: In function 'STATUS_PushMessage': ../../../libinchi/src/ixa/ixa_status.c:171:12: warning: implicit declaration of function 'vsnprintf'; did you mean 'vsprintf'? [-Wimplicit-function-declaration] size = vsnprintf(buffer, sizeof(buffer), pFormat, arguments) + 1; ^~~~~~~~~ vsprintf gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../libinchi/src/ixa/ixa_builder.c ../../../libinchi/src/ixa/ixa_builder.c: In function 'IXA_INCHIBUILDER_SetMolecule': ../../../libinchi/src/ixa/ixa_builder.c:874:30: warning: 'internal2' may be used uninitialized in this function [-Wmaybe-uninitialized] flag = IsRectOrAntiRectCentre(hStatus, hMolecule, ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vertex1a, vertex1b, internal1, vertex2a, vertex2b, internal2); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../../../libinchi/src/ixa/ixa_builder.c:874:30: warning: 'internal1' may be used uninitialized in this function [-Wmaybe-uninitialized] gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../libinchi/src/ixa/ixa_mol.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../libinchi/src/ixa/ixa_read_inchi.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/mol_fmt1.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/mol_fmt2.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/mol_fmt3.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/mol2atom.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/mol_fmt4.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/readinch.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/runichi.c ../../../../INCHI_BASE/src/readinch.c: In function 'InchiToInpAtom': ../../../../INCHI_BASE/src/readinch.c:626:18: warning: the address of 'szLine' will always evaluate as 'true' [-Waddress] if ( szLine && strstr(szLine, "/Z:")) ^~~~~~ gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/runichi2.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/runichi3.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/runichi4.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/sha2.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/strutil.c gcc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -ansi -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -Wno-comment -Wno-parentheses -Wno-unused -Wno-unused-but-set-variable -c ../../../../INCHI_BASE/src/util.c gcc -shared -o ../../../bin/Linux/libinchi.so.1.05.00 \ ichican2.o ichicano.o ichi_io.o ichierr.o ichicans.o ichiisot.o ichilnct.o ichimak2.o ichimake.o ichimap1.o ichimap2.o ichimap4.o ichinorm.o ichiparm.o ichiprt1.o ichiprt2.o ichiprt3.o ichiqueu.o ichiring.o ichisort.o ichister.o ichitaut.o ichi_bns.o inchi_dll.o ichiread.o ichirvr1.o ichirvr2.o ichirvr3.o ichirvr4.o ichirvr5.o ichirvr6.o ichirvr7.o ikey_dll.o ikey_base26.o inchi_dll_main.o inchi_dll_a.o inchi_dll_a2.o inchi_dll_b.o ixa_inchikey_builder.o ixa_read_mol.o ixa_status.o ixa_builder.o ixa_mol.o ixa_read_inchi.o mol_fmt1.o mol_fmt2.o mol_fmt3.o mol2atom.o mol_fmt4.o readinch.o runichi.o runichi2.o runichi3.o runichi4.o sha2.o strutil.o util.o -Wl,--version-script=libinchi.map,-z,relro,-soname,libinchi.so.1 -lm ln -fs libinchi.so.1.05.00 \ ../../../bin/Linux/libinchi.so.1 gcc -s -o ../../../bin/Linux/inchi_main e_0dstereo.o e_ichimain.o e_ichi_io.o e_ichi_parms.o e_inchi_atom.o e_mol2atom.o e_readinch.o e_readmol.o e_readstru.o e_util.o e_ichimain_a.o \ ../../../bin/Linux/libinchi.so.1.05.00 -lm + popd ~/build/BUILD/INCHI-1-SRC + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.SLlGVA + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64 ++ dirname /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64 + cd INCHI-1-SRC + mkdir -p /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/bin /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/lib64 /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/include/inchi + install -pm 755 INCHI_API/bin/Linux/inchi_main /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/bin/inchi-1 + install -p INCHI_API/bin/Linux/libinchi.so.1.05.00 /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/lib64 + ln -s libinchi.so.1.05.00 /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/lib64/libinchi.so.1 + ln -s libinchi.so.1 /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/lib64/libinchi.so + install -pm644 INCHI_BASE/src/inchi_api.h INCHI_BASE/src/ixa.h /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/include/inchi + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig /sbin/ldconfig: Warning: ignoring configuration file that cannot be opened: /etc/ld.so.conf: No such file or directory + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip /usr/bin/strip + /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Processing files: inchi-1.0.5-3.fc28.riscv64 Provides: inchi = 1.0.5-3.fc28 inchi(riscv-64) = 1.0.5-3.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libinchi.so.1()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) rtld(GNU_HASH) Processing files: inchi-libs-1.0.5-3.fc28.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.SoDvX5 + umask 022 + cd /builddir/build/BUILD + cd INCHI-1-SRC + DOCDIR=/builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/share/doc/inchi-libs + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/share/doc/inchi-libs + cp -pr readme.txt /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/share/doc/inchi-libs + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.AmWx1W + umask 022 + cd /builddir/build/BUILD + cd INCHI-1-SRC + LICENSEDIR=/builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/share/licenses/inchi-libs + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/share/licenses/inchi-libs + cp -pr LICENCE /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/share/licenses/inchi-libs + exit 0 Provides: inchi-libs = 1.0.5-3.fc28 inchi-libs(riscv-64) = 1.0.5-3.fc28 libinchi.so.1()(64bit) Requires(interp): /sbin/ldconfig /sbin/ldconfig Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires(post): /sbin/ldconfig Requires(postun): /sbin/ldconfig Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) rtld(GNU_HASH) Obsoletes: inchi < 1.0.4-6.fc28 Processing files: inchi-devel-1.0.5-3.fc28.riscv64 Provides: inchi-devel = 1.0.5-3.fc28 inchi-devel(riscv-64) = 1.0.5-3.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libinchi.so.1()(64bit) Processing files: inchi-doc-1.0.5-3.fc28.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.hIbcTZ + umask 022 + cd /builddir/build/BUILD + cd INCHI-1-SRC + DOCDIR=/builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/share/doc/inchi-doc + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/share/doc/inchi-doc + cp -pr INCHI-1-DOC/External-contributors.pdf INCHI-1-DOC/InChI_API_Reference.pdf INCHI-1-DOC/InChI_TechMan.pdf INCHI-1-DOC/InChI_UserGuide.pdf INCHI-1-DOC/RelNotes.pdf INCHI-1-DOC/readme.txt /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64/usr/share/doc/inchi-doc + exit 0 Provides: inchi-doc = 1.0.5-3.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64 Wrote: /builddir/build/SRPMS/inchi-1.0.5-3.fc28.src.rpm Wrote: /builddir/build/RPMS/riscv64/inchi-1.0.5-3.fc28.riscv64.rpm Wrote: /builddir/build/RPMS/riscv64/inchi-libs-1.0.5-3.fc28.riscv64.rpm Wrote: /builddir/build/RPMS/riscv64/inchi-devel-1.0.5-3.fc28.riscv64.rpm Wrote: /builddir/build/RPMS/noarch/inchi-doc-1.0.5-3.fc28.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.cfu9UF + umask 022 + cd /builddir/build/BUILD + cd INCHI-1-SRC + /usr/bin/rm -rf /builddir/build/BUILDROOT/inchi-1.0.5-3.fc28.riscv64 + exit 0 + touch /buildok + cleanup + set +e + sync + sleep 5 + sync + poweroff Terminated ++ cleanup ++ set +e ++ sync +++ cleanup +++ set +e +++ sync +++ sleep 5 +++ sync +++ poweroff