Field3D
Field3DFileHDF5.cpp File Reference

Contains implementations of Field3DFileHDF5-related member functions. More...

#include <sys/stat.h>
#include <unistd.h>
#include <hdf5.h>
#include <H5Epublic.h>
#include <boost/tokenizer.hpp>
#include <boost/utility.hpp>
#include "Field3DFileHDF5.h"
#include "Field.h"
#include "ClassFactory.h"

Go to the source code of this file.

Namespaces

namespace  InputFileHDF5
 Namespace for file input specifics.
 

Functions

FIELD3D_API herr_t InputFileHDF5::parseLayers (hid_t loc_id, const char *partitionName, const H5L_info_t *linfo, void *opdata)
 Gets called from readPartitionAndLayerInfo to check each group found under the root of the file. It checks to see if it can find a "partition" and then passes that to writePartition.
 
FIELD3D_API herr_t InputFileHDF5::parsePartitions (hid_t loc_id, const char *partitionName, const H5L_info_t *linfo, void *opdata)
 Gets called from readPartitionAndLayerInfo to check each group found under the root of the file. It checks to see if it can find a "partition" and then passes that to writePartition.
 
FieldMapping::Ptr readFieldMapping (hid_t mappingGroup)
 This function creates a FieldMappingIO instance based on className read from mappingGroup location which then reads FieldMapping data.
 
bool writeField (hid_t layerGroup, FieldBase::Ptr field)
 This function creates a FieldIO instance based on field->className() which then writes the field data in layerGroup location.
 
bool writeFieldMapping (hid_t mappingGroup, FieldMapping::Ptr mapping)
 This function creates a FieldMappingIO instance based on mapping->className() which then writes FieldMapping data to mappingGroup location.
 

Detailed Description

Contains implementations of Field3DFileHDF5-related member functions.

Definition in file Field3DFileHDF5.cpp.

Function Documentation

◆ writeField()

bool writeField ( hid_t layerGroup,
FieldBase::Ptr field )

This function creates a FieldIO instance based on field->className() which then writes the field data in layerGroup location.

Definition at line 1589 of file Field3DFileHDF5.cpp.

1590{
1592
1593 FieldIO::Ptr io = factory.createFieldIO(field->className());
1594 assert(io != 0);
1595 if (!io) {
1596 Msg::print(Msg::SevWarning, "Unable to find class type: " +
1597 field->className());
1598 return false;
1599 }
1600
1601 // Add class name attribute
1603 field->className())) {
1604 Msg::print(Msg::SevWarning, "Error adding class name attribute.");
1605 return false;
1606 }
1607
1608 return io->write(layerGroup, field);
1609}
#define FIELD3D_MTX_T
Definition StdMathLib.h:99
static ClassFactory & singleton()
}
boost::intrusive_ptr< FieldIO > Ptr
Definition FieldIO.h:91
FIELD3D_API bool writeAttribute(hid_t location, const std::string &attrName, const std::string &value)
Writes a string attribute.
@ SevWarning
Definition Log.h:68
FIELD3D_API void print(Severity severity, const std::string &message)
Sends the string to the assigned output, prefixing the message with the severity.
Definition Log.cpp:70

References FIELD3D_MTX_T, Msg::print(), Msg::SevWarning, ClassFactory::singleton(), and Hdf5Util::writeAttribute().

Referenced by Field3DOutputFileHDF5::writeLayer(), and Field3DOutputFile::writeLayer().

◆ readFieldMapping()

FieldMapping::Ptr readFieldMapping ( hid_t mappingGroup)

This function creates a FieldMappingIO instance based on className read from mappingGroup location which then reads FieldMapping data.

Definition at line 1613 of file Field3DFileHDF5.cpp.

1614{
1616
1617 std::string className;
1618
1620 Msg::print(Msg::SevWarning, "Couldn't find " + k_mappingTypeAttrName +
1621 " attribute");
1622 return FieldMapping::Ptr();
1623 }
1624
1625 FieldMappingIO::Ptr io = factory.createFieldMappingIO(className);
1626 assert(io != 0);
1627 if (!io) {
1628 Msg::print(Msg::SevWarning, "Unable to find class type: " +
1629 className);
1630 return FieldMapping::Ptr();
1631 }
1632
1633
1634 FieldMapping::Ptr mapping = io->read(mappingGroup);
1635 if (!mapping) {
1636 Msg::print(Msg::SevWarning, "Couldn't read mapping");
1637 return FieldMapping::Ptr();
1638 }
1639
1640 return mapping;
1641}
boost::intrusive_ptr< FieldMappingIO > Ptr
boost::intrusive_ptr< FieldMapping > Ptr
FIELD3D_API bool readAttribute(hid_t location, const std::string &attrName, std::string &value)
Reads a string attribute.

References FIELD3D_MTX_T, Msg::print(), Hdf5Util::readAttribute(), Msg::SevWarning, and ClassFactory::singleton().

Referenced by Field3DInputFile::readPartitionAndLayerInfo(), and Field3DInputFileHDF5::readPartitionAndLayerInfo().

◆ writeFieldMapping()

bool writeFieldMapping ( hid_t mappingGroup,
FieldMapping::Ptr mapping )

This function creates a FieldMappingIO instance based on mapping->className() which then writes FieldMapping data to mappingGroup location.

Definition at line 1645 of file Field3DFileHDF5.cpp.

1646{
1648
1649 std::string className = mapping->className();
1650
1652 Msg::print(Msg::SevWarning, "Couldn't add " + className + " attribute");
1653 return false;
1654 }
1655
1656 FieldMappingIO::Ptr io = factory.createFieldMappingIO(className);
1657 assert(io != 0);
1658 if (!io) {
1659 Msg::print(Msg::SevWarning, "Unable to find class type: " +
1660 className);
1661 return false;
1662 }
1663
1664 return io->write(mappingGroup, mapping);
1665}

References FIELD3D_MTX_T, Msg::print(), Msg::SevWarning, ClassFactory::singleton(), and Hdf5Util::writeAttribute().

Referenced by Field3DOutputFileHDF5::writeMapping().