Source code for fsl.scripts.remove_ext

#
# remove_ext.py - Remove file extensions from NIFTI image paths
#
# Author: Paul McCarthy <pauldmccarthy@gmail.com>
#


import sys
import warnings

import fsl.utils.path as fslpath

# See atlasq.py for explanation
with warnings.catch_warnings():
    warnings.filterwarnings("ignore", category=FutureWarning)
    import fsl.data.image as fslimage


usage = """Usage: remove_ext <list of image paths to remove extension from>
""".strip()


ALLOWED_EXTENSIONS = fslimage.ALLOWED_EXTENSIONS + ['.mnc', '.mnc.gz']
"""List of file extensions that are removed by ``remove_ext``. """


[docs]def main(argv=None): """Removes file extensions from all paths which are specified on the command line. """ if argv is None: argv = sys.argv[1:] if len(argv) < 1: print(usage) return 1 removed = [] for path in argv: removed.append(fslpath.removeExt(path, ALLOWED_EXTENSIONS)) print(' '.join(removed)) return 0
if __name__ == '__main__': sys.exit(main())