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MapAlignmentAlgorithm Member List

This is the complete list of members for MapAlignmentAlgorithm, including all inherited members.

alignCompactFeatureMaps(std::vector< std::vector< Peak2D > > &, std::vector< TransformationDescription > &)MapAlignmentAlgorithmvirtual
alignConsensusMaps(std::vector< ConsensusMap > &, std::vector< TransformationDescription > &)MapAlignmentAlgorithmvirtual
alignFeatureMaps(std::vector< FeatureMap > &, std::vector< TransformationDescription > &)MapAlignmentAlgorithmvirtual
alignPeakMaps(std::vector< MSExperiment<> > &, std::vector< TransformationDescription > &)MapAlignmentAlgorithmvirtual
alignPeptideIdentifications(std::vector< std::vector< PeptideIdentification > > &, std::vector< TransformationDescription > &)MapAlignmentAlgorithmvirtual
check_defaults_DefaultParamHandlerprotected
CMD enum valueProgressLogger
current_logger_ProgressLoggermutableprotected
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
endProgress() const ProgressLogger
error_name_DefaultParamHandlerprotected
fitModel(const String &model_type, const Param &params, std::vector< TransformationDescription > &trafos)MapAlignmentAlgorithmstatic
getDefaults() const DefaultParamHandler
getLogType() const ProgressLogger
getName() const DefaultParamHandler
getParameters() const DefaultParamHandler
getSubsections() const DefaultParamHandler
GUI enum valueProgressLogger
last_invoke_ProgressLoggermutableprotected
LogType enum nameProgressLogger
logTypeToFactoryName_(LogType type)ProgressLoggerprotectedstatic
MapAlignmentAlgorithm()MapAlignmentAlgorithm
MapAlignmentAlgorithm(const MapAlignmentAlgorithm &)MapAlignmentAlgorithmprivate
NONE enum valueProgressLogger
operator=(const MapAlignmentAlgorithm &)MapAlignmentAlgorithmprivate
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
OpenMS::ProgressLogger::operator=(const ProgressLogger &other)ProgressLogger
operator==(const DefaultParamHandler &rhs) const DefaultParamHandlervirtual
param_DefaultParamHandlerprotected
ProgressLogger()ProgressLogger
ProgressLogger(const ProgressLogger &other)ProgressLogger
recursion_depth_ProgressLoggerprotectedstatic
registerChildren()MapAlignmentAlgorithmstatic
setLogType(LogType type) const ProgressLogger
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
setProgress(SignedSize value) const ProgressLogger
setReference(Size reference_index=0, const String &reference_file="")MapAlignmentAlgorithmvirtual
startProgress(SignedSize begin, SignedSize end, const String &label) const ProgressLogger
subsections_DefaultParamHandlerprotected
type_ProgressLoggermutableprotected
updateMembers_()DefaultParamHandlerprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
~DefaultParamHandler()DefaultParamHandlervirtual
~MapAlignmentAlgorithm()MapAlignmentAlgorithmvirtual
~ProgressLogger()ProgressLogger

OpenMS / TOPP release 2.0.0 Documentation generated on Fri May 29 2015 17:20:39 using doxygen 1.8.9.1