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PeakPickerCWT Member List

This is the complete list of members for PeakPickerCWT, including all inherited members.

addPeak_(std::vector< PeakShape > &peaks_DC, PeakArea_ &area, double left_width, double right_width, OptimizePeakDeconvolution::Data &data)PeakPickerCWTprotected
check_defaults_DefaultParamHandlerprotected
CMD enum valueProgressLogger
ConstPeakIterator typedefPeakPickerCWT
correlate_(const PeakShape &peak, const PeakArea_ &area, Int direction=0) const PeakPickerCWTprotected
current_logger_ProgressLoggermutableprotected
deconvolutePeak_(PeakShape &shape, std::vector< PeakShape > &peak_shapes, double peak_bound_cwt)PeakPickerCWTprotected
deconvolution_PeakPickerCWTprotected
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
determineChargeState_(std::vector< double > &peak_values)PeakPickerCWTprotected
endProgress() const ProgressLogger
error_name_DefaultParamHandlerprotected
estimatePeakWidth(const MSExperiment<> &input)PeakPickerCWT
fitPeakShape_(const PeakArea_ &area, bool enable_centroid_fit)PeakPickerCWTprotected
fwhm_bound_PeakPickerCWTprotected
getDefaults() const DefaultParamHandler
getLogType() const ProgressLogger
getMaxPosition_(PeakIterator first, PeakIterator last, const ContinuousWaveletTransform &wt, PeakArea_ &area, Int distance_from_scan_border, Int ms_level, double peak_bound_cwt, double peak_bound_ms2_level_cwt, Int direction=1)PeakPickerCWTprotected
getName() const DefaultParamHandler
getNumberOfPeaks_(ConstPeakIterator first, ConstPeakIterator last, std::vector< double > &peak_values, Int direction, double resolution, ContinuousWaveletTransformNumIntegration &wt, double peak_bound_cwt)PeakPickerCWTprotected
getParameters() const DefaultParamHandler
getPeakArea_(const PeakArea_ &area, double &area_left, double &area_right)PeakPickerCWTprotected
getPeakCentroid_(PeakArea_ &area)PeakPickerCWTprotected
getPeakEndPoints_(PeakIterator first, PeakIterator last, PeakArea_ &area, Int distance_from_scan_border, Int &peak_left_index, Int &peak_right_index, ContinuousWaveletTransformNumIntegration &wt)PeakPickerCWTprotected
getSubsections() const DefaultParamHandler
GUI enum valueProgressLogger
init_()PeakPickerCWTprotected
initializeWT_(ContinuousWaveletTransformNumIntegration &wt, double &peak_bound_cwt, double &peak_bound_ms2_level_cwt)PeakPickerCWTprotected
last_invoke_ProgressLoggermutableprotected
LogType enum nameProgressLogger
logTypeToFactoryName_(LogType type)ProgressLoggerprotectedstatic
lorentz_(double height, double lambda, double pos, double x)PeakPickerCWTprotected
noise_level_PeakPickerCWTprotected
NONE enum valueProgressLogger
OpenMS::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
OpenMS::ProgressLogger::operator=(const ProgressLogger &other)ProgressLogger
operator==(const DefaultParamHandler &rhs) const DefaultParamHandlervirtual
optimization_PeakPickerCWTprotected
param_DefaultParamHandlerprotected
peak_bound_PeakPickerCWTprotected
peak_bound_ms2_level_PeakPickerCWTprotected
peak_corr_bound_PeakPickerCWTprotected
PeakIterator typedefPeakPickerCWT
PeakPickerCWT()PeakPickerCWT
pick(const MSSpectrum<> &input, MSSpectrum<> &output)PeakPickerCWT
pickExperiment(const MSExperiment<> &input, MSExperiment<> &output)PeakPickerCWT
ProgressLogger()ProgressLogger
ProgressLogger(const ProgressLogger &other)ProgressLogger
radius_PeakPickerCWTprotected
recursion_depth_ProgressLoggerprotectedstatic
scale_PeakPickerCWTprotected
setLogType(LogType type) const ProgressLogger
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
setProgress(SignedSize value) const ProgressLogger
signal_to_noise_PeakPickerCWTprotected
startProgress(SignedSize begin, SignedSize end, const String &label) const ProgressLogger
subsections_DefaultParamHandlerprotected
two_d_optimization_PeakPickerCWTprotected
type_ProgressLoggermutableprotected
updateMembers_()PeakPickerCWTprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
~DefaultParamHandler()DefaultParamHandlervirtual
~PeakPickerCWT()PeakPickerCWTvirtual
~ProgressLogger()ProgressLogger

OpenMS / TOPP release 2.0.0 Documentation generated on Fri May 29 2015 17:20:42 using doxygen 1.8.9.1