35 #ifndef OPENMS_VISUAL_TOPPVIEWIDENTIFICATIONVIEWBEHAVIOR_H
36 #define OPENMS_VISUAL_TOPPVIEWIDENTIFICATIONVIEWBEHAVIOR_H
123 #endif // OPENMS_VISUAL_TOPPVIEWIDENTIFICATIONVIEWBEHAVIOR_H
void removeTheoreticalSpectrumLayer_()
removes all layer with theoretical spectrum generated in identification view
Behavior of TOPPView in identification mode.
Definition: TOPPViewIdentificationViewBehavior.h:50
LayerData::FeatureMapSharedPtrType FeatureMapSharedPtrType
Definition: TOPPViewIdentificationViewBehavior.h:59
Main window of TOPPView tool.
Definition: TOPPViewBase.h:106
A container for features.
Definition: FeatureMap.h:93
virtual void deactivate1DSpectrum(int index)
Behavior for deactivate1DSpectrum.
A container for consensus elements.
Definition: ConsensusMap.h:72
std::vector< Annotation1DItem * > temporary_annotations_
Definition: TOPPViewIdentificationViewBehavior.h:119
virtual void deactivateBehavior()
Slot for behavior deactivation.
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47
virtual void activate1DSpectrum(int index)
Behavior for activate1DSpectrum.
void setVisibleArea1D(double l, double h)
TOPPViewIdentificationViewBehavior(TOPPViewBase *parent)
Construct the behaviour with its parent.
LayerData::ExperimentSharedPtrType ExperimentSharedPtrType
Definition: TOPPViewIdentificationViewBehavior.h:69
LayerData::FeatureMapType FeatureMapType
Definition: TOPPViewIdentificationViewBehavior.h:57
void addPeakAnnotations_(const std::vector< PeptideIdentification > &ph)
Adds annotation (compound name, adducts, ppm error) to a peak in 1D spectra.
Representation of a peptide hit.
Definition: PeptideHit.h:55
virtual void showSpectrumAs1D(int index)
Behavior for showSpectrumAs1D.
void addTheoreticalSpectrumLayer_(const PeptideHit &ph)
Adds a theoretical spectrum as set from the preferences dialog for the peptide hit.
ExperimentType::SpectrumType SpectrumType
Peak spectrum type.
Definition: TOPPViewIdentificationViewBehavior.h:71
In-Memory representation of a mass spectrometry experiment.
Definition: MSExperiment.h:69
LayerData::ConsensusMapType ConsensusMapType
Definition: TOPPViewIdentificationViewBehavior.h:62
Interface class to model different behaviors of TOPPView.
Definition: TOPPViewBehaviorInterface.h:47
virtual void activateBehavior()
Slot for behavior activation.
LayerData::ConsensusMapSharedPtrType ConsensusMapSharedPtrType
Definition: TOPPViewIdentificationViewBehavior.h:64
TOPPViewBase * tv_
Definition: TOPPViewIdentificationViewBehavior.h:116
LayerData::ExperimentType ExperimentType
Definition: TOPPViewIdentificationViewBehavior.h:67
void addPrecursorLabels1D_(const std::vector< Precursor > &pcs)
Adds labels for the provided precursors to the 1D spectrum.
void removeTemporaryAnnotations_(Size spectrum_index)
Removes the precursor labels for from the specified 1D spectrum.