This application converts several OpenMS XML formats (featureXML, consensusXML, and idXML) to mzTab.
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ProteinQuantifier | external tools (MS Excel, OpenOffice, Notepad) |
See the mzTab specification for details on the format.
The command line parameters of this tool are:
MzTabExporter -- Exports various XML formats to an mzTab file. Version: 2.0.0 May 29 2015, 13:57:09, Revision: GIT-NOTFOUND Usage: MzTabExporter <options> Options (mandatory options marked with '*'): -in_feature <file> FeatureXMLs used to generate the mzTab file. (valid formats: 'featureXML') -in_consensus <file> ConsensusXMLs used to generate the mzTab file. (valid formats: 'consensusXML') -in_id <file> Identifications used to generate the mzTab file. (valid formats: 'idXML') -out <file>* Output file (mzTab) (valid formats: 'csv') Common TOPP options: -ini <file> Use the given TOPP INI file -threads <n> Sets the number of threads allowed to be used by the TOPP tool (default: '1') -write_ini <file> Writes the default configuration file --help Shows options --helphelp Shows all options (including advanced)
INI file documentation of this tool:
OpenMS / TOPP release 2.0.0 | Documentation generated on Fri May 29 2015 17:20:34 using doxygen 1.8.9.1 |